Popoola, O. D., and *Thomas, B. T.
Department of Microbiology, Olabisi Onabanjo University, Ago Iwoye, Ogun State, Nigeria
*Correspondence to: benthoa2013@gmail.com; +2348064011412; ORCID: //orcid.org/0000-0003-0675-5749
Abstract:
Background: The understanding of the secondary structure of the class 1 integron coded protein is necessary to decipher potential drug target and also to infer evolutionary ancestry at the proteomic level. This study was therefore aimed at determining the secondary structure of class 1 integron-coded protein and also to provide information on their evolutionary ancestry.
Methodology: Five different sequences of Citrobacter freundii with the following accession numbers; KP902625.1, KP902624.1, KP902623.1, KP901093.1 and KP902609.1 were obtained using nucleotide BLAST (//blast. ncbi.nlm.nih.gov/Blast.cgi) and subjected to evolutionary analysis, pairwise distance calculation, secondary structure and neutrality test using MEGA explorer, Kimura 2 parameter, SOPMA tool and Tajima’s test respectively. Continue reading “Bioinformatic analysis of multi-drug resistant class 1 integron-coded protein of Citrobacter freundii”